{"id":39394,"date":"2015-02-26T14:22:12","date_gmt":"2015-02-26T14:22:12","guid":{"rendered":"https:\/\/\u200bnew.iter.es\/prepabel\/"},"modified":"2025-02-26T14:22:12","modified_gmt":"2025-02-26T14:22:12","slug":"prepabel","status":"publish","type":"post","link":"https:\/\/www.iter.es\/en\/prepabel\/","title":{"rendered":"prepABEL"},"content":{"rendered":"<p>prepABEL is a single script combining BASH line commands to grab data from dosage VCF files generated by Michigan Imputation Server and prepare input files to run survival analyses with ProbABEL, a software to do survival analysis relying upon imputed genotyped dosage data. This tool is being used by ITER and its collaborators to analyze the survival of patients affected by idiopathic pulmonary fibrosis in an ambitious international project. <\/p>\n<p><strong>Links of interest:<\/strong><\/p>\n<ul>\n<li><a class=\"sub\" href=\"https:\/\/github.com\/genomicsITER\/prepABEL\" target=\"_blank\" rel=\"noopener\">PREPABEL<\/a><\/li>\n<li><a href=\"https:\/\/www.iter.es\/datos\/?lang=en\" target=\"_blank\" rel=\"noopener\">DATA<\/a><\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>prepABEL is a single script combining BASH line commands to grab data from dosage VCF files generated by Michigan Imputation Server and prepare input files to run survival analyses with ProbABEL, a software to do survival analysis relying upon imputed genotyped dosage data. This tool is being used by ITER and its collaborators to analyze<\/p>\n","protected":false},"author":1,"featured_media":35742,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[210,218],"tags":[],"class_list":["post-39394","post","type-post","status-publish","format-standard","has-post-thumbnail","category-activities","category-products"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v28.1 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>prepABEL - ITER - Instituto Tecnol\u00f3gico y de Energ\u00edas Renovables<\/title>\n<meta name=\"description\" content=\"Descubre las \u00faltimas noticias, proyectos e iniciativas del ITER en energ\u00edas renovables, innovaci\u00f3n tecnol\u00f3gica, sostenibilidad e investigaci\u00f3n en Tenerife.\" \/>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.iter.es\/en\/prepabel\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"prepABEL - 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